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Proceedings Paper

Investigation of structural and statistical characteristics of interfering GB-speckles, coding the nucleotide sequences of the gene GPCR of Lumpy Skin Disease Virus
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Paper Abstract

Analysis of structural properties of the interfering GB-speckles, generated for nucleotide sequences of Lumpy Skin Disease Virus (LSDV), has been carried out. It has been shown, that at the interference of two LSDV GB-specklepatterns, three types of interference pictures are forming: quasi-random speckle structure without interference fringes, fringes, modulated by speckles, or having bends and pure regular fringes without visible speckle-modulation. It has been found, that width of fringes and their orientation depend on position of SNP in comparing nucleotide sequences. It has been demonstrated that implication of interference of two GB-speckles, generated on the target virus nucleotide sequences, can be considered as a new direction in modern bioinformatics.

Paper Details

Date Published: 3 June 2019
PDF: 9 pages
Proc. SPIE 11065, Saratov Fall Meeting 2018: Optical and Nano-Technologies for Biology and Medicine, 110650K (3 June 2019); doi: 10.1117/12.2522980
Show Author Affiliations
O. V. Ulianova, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
Yu. V. Saltykov, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
S. S. Zaytsev, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
I. A. Subbotina, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
N. N. Filonova, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
A. M. Lyapina, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
S. S. Ulyanov, Saratov State Univ. (Russian Federation)
Federal Research Ctr. for Virology and Microbiology (Russian Federation)
V. A. Feodorova, Federal Research Ctr. for Virology and Microbiology (Russian Federation)


Published in SPIE Proceedings Vol. 11065:
Saratov Fall Meeting 2018: Optical and Nano-Technologies for Biology and Medicine
Elina A. Genina; Valery V. Tuchin, Editor(s)

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