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Proceedings Paper

Investigation of statistical characteristics of GB-speckles, coding nucleotide sequences of the gene GPCR of Lumpy Skin Disease virus
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Paper Abstract

For the first time gene-based speckles (GB-speckles) have been applied for analysis of nucleotide sequences of the gene GPCR of the Lumpy Skin Disease Virus (LSDV). The 1st and 2nd order statistics of the 2D speckle structures corresponding to nucleotide sequences of LSDV have been analyzed. It has been shown that these GB-speckles are forming in the case of small number of scatterers and they obey to non-gaussian statistics. It has been demonstrated that application of the GB-speckles, generated on the target virus nucleotide sequences has the great perspectives from viewpoint of modern bioinformatics.

Paper Details

Date Published: 3 June 2019
PDF: 10 pages
Proc. SPIE 11065, Saratov Fall Meeting 2018: Optical and Nano-Technologies for Biology and Medicine, 110650J (3 June 2019); doi: 10.1117/12.2522585
Show Author Affiliations
O. V. Ulianova, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
I. A. Subbotina, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
N. N. Filonova, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
A. M. Lyapina, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
Yu. V. Saltykov, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
S. S. Zaytsev, Federal Research Ctr. for Virology and Microbiology (Russian Federation)
S. S. Ulyanov, Saratov State Univ. (Russian Federation)
Federal Research Ctr. for Virology and Microbiology (Russian Federation)
V. A. Feodorova, Federal Research Ctr. for Virology and Microbiology (Russian Federation)


Published in SPIE Proceedings Vol. 11065:
Saratov Fall Meeting 2018: Optical and Nano-Technologies for Biology and Medicine
Elina A. Genina; Valery V. Tuchin, Editor(s)

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