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Proceedings Paper

Noncoding sequence classification based on wavelet transform analysis: part I
Author(s): O. Paredes; M. Strojnik; R. Romo-Vázquez; H. Vélez Pérez; R. Ranta; G. Garcia-Torales; M. K. Scholl; J. A. Morales
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Paper Abstract

DNA sequences in human genome can be divided into the coding and noncoding ones. Coding sequences are those that are read during the transcription. The identification of coding sequences has been widely reported in literature due to its much-studied periodicity. Noncoding sequences represent the majority of the human genome. They play an important role in gene regulation and differentiation among the cells. However, noncoding sequences do not exhibit periodicities that correlate to their functions. The ENCODE (Encyclopedia of DNA elements) and Epigenomic Roadmap Project projects have cataloged the human noncoding sequences into specific functions. We study characteristics of noncoding sequences with wavelet analysis of genomic signals.

Paper Details

Date Published: 7 September 2017
PDF: 11 pages
Proc. SPIE 10403, Infrared Remote Sensing and Instrumentation XXV, 104030V (7 September 2017); doi: 10.1117/12.2274460
Show Author Affiliations
O. Paredes, Univ. de Guadalajara (Mexico)
M. Strojnik, Ctr. de Investigaciones en Óptica, A.C. (Mexico)
R. Romo-Vázquez, Univ. de Guadalajara (Mexico)
H. Vélez Pérez, Univ. de Guadalajara (Mexico)
R. Ranta, CRAN, ENSEM, Univ. de Lorraine (France)
G. Garcia-Torales, Ctr. de Investigaciones en Óptica, A.C. (Mexico)
Univ. de Guadalajara (Mexico)
M. K. Scholl, Alenka Associates (United States)
J. A. Morales, Univ. de Guadalajara (Mexico)


Published in SPIE Proceedings Vol. 10403:
Infrared Remote Sensing and Instrumentation XXV
Marija Strojnik; Maureen S. Kirk, Editor(s)

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