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PROCEEDINGS VOLUME 10574

Medical Imaging 2018: Image Processing
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Volume Details

Volume Number: 10574
Date Published: 22 May 2018

Table of Contents
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Front Matter: Volume 10574
Author(s): Proceedings of SPIE
Sulcal depth-based cortical shape analysis in normal healthy control and schizophrenia groups
Author(s): Ilwoo Lyu; Hakmook Kang; Neil D. Woodward; Bennett A. Landman
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Skull segmentation from MR scans using a higher-order shape model based on convolutional restricted Boltzmann machines
Author(s): Oula Puonti; Koen Van Leemput; Jesper D. Nielsen; Christian Bauer; Hartwig Roman Siebner; Kristoffer H. Madsen; Axel Thielscher
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Imaging biomarkers for the diagnosis of Prion disease
Author(s): Liane S. Canas; Benjamin Yvernault; Carole Sudre; Enrico De Vita; M. Jorge Cardoso; John Thornton; Frederik Barkhof; Sébastien Ourselin; Simon Mead; Marc Modat
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Constructing statistically unbiased cortical surface templates using feature-space covariance
Author(s): Prasanna Parvathaneni; Ilwoo Lyu; Yuankai Huo; Justin Blaber; Allison E. Hainline; Hakmook Kang; Neil D. Woodward; Bennett A. Landman
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Segmentation of anatomical structures in cardiac CTA using multi-label V-Net
Author(s): Hui Tang; Mehdi Moradi; Ahmed El Harouni; Hongzhi Wang; Gopalkrishna Veni; Prasanth Prasanna; Tanveer Syeda-Mahmood
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Iterative convolutional neural networks for automatic vertebra identification and segmentation in CT images
Author(s): Nikolas Lessmann; Bram van Ginneken; Ivana Išgum
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Splenomegaly segmentation using global convolutional kernels and conditional generative adversarial networks
Author(s): Yuankai Huo; Zhoubing Xu; Shunxing Bao; Camilo Bermudez; Andrew J. Plassard; Jiaqi Liu; Yuang Yao; Albert Assad; Richard G. Abramson; Bennett A. Landman
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Segmentation of left ventricle myocardium in porcine cardiac cine MR images using a hybrid of fully convolutional neural networks and convolutional LSTM
Author(s): Dongqing Zhang; Ilknur Icke; Belma Dogdas; Sarayu Parimal; Smita Sampath; Joseph Forbes; Ansuman Bagchi; Chih-Liang Chin; Antong Chen
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Towards dense volumetric pancreas segmentation in CT using 3D fully convolutional networks
Author(s): Holger Roth; Masahiro Oda; Natsuki Shimizu; Hirohisa Oda; Yuichiro Hayashi; Takayuki Kitasaka; Michitaka Fujiwara; Kazunari Misawa; Kensaku Mori
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An effective fully deep convolutional neural networks for mitochondria segmentation based on ATUM-SEM
Author(s): Chi Xiao; Weifu Li; Xi Chen; Hua Han; Qiwei Xie
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A log-Euclidean and total variation based variational framework for computational sonography
Author(s): Jyotirmoy Banerjee; Premal A. Patel; Fred Ushakov; Donald Peebles; Jan Deprest; Sébastien Ourselin; David Hawkes; Tom Vercauteren
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Visualization of coronary artery calcium in dual energy chest radiography using automatic rib suppression
Author(s): Bo Zhou; Yi Jiang; Di Wen; Robert C. Gilkeson; Jun Hou; David L. Wilson
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Radiation dose reduction in digital breast tomosynthesis (DBT) by means of deep-learning-based supervised image processing
Author(s): Junchi Liu; Amin Zarshenas; Ammar Qadir; Zheng Wei; Limin Yang; Laurie Fajardo; Kenji Suzuki
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Image enhancement method for digital mammography
Author(s): Nikolai V. Slavine; Stephen Seiler; Timothy J. Blackburn; Robert E. Lenkinski
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Image reconstruction using priors from deep learning
Author(s): Devi Ayyagari; Nisha Ramesh; Dimitri Yatsenko; Tolga Tasdizen; Cristain Atria
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Automated abdominal plane and circumference estimation in 3D US for fetal screening
Author(s): C. Lorenz; T. Brosch; C. Ciofolo-Veit; T. Klinder; T. Lefevre; A. Cavallaro; I. Salim; A. T. Papageorghiou; C. Raynaud; D. Roundhill; L. Rouet; N. Schadewaldt; A. Schmidt-Richberg
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Left ventricle segmentation in 3D ultrasound by combining structured random forests with active shape models
Author(s): F. Khellaf; S. Leclerc; J. D. Voorneveld; R. S. Bandaru; J. G. Bosch; O. Bernard
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Fine segmentation of tiny blood vessel based on full connected conditional random field
Author(s): Chenglong Wang; Masahiro Oda; Yasushi Yoshino; Tokunori Yamamoto; Kensaku Mori
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Automatic and fast CT liver segmentation using sparse ensemble with machine learned contexts
Author(s): Bhavya Ajani; Aditya Bharadwaj; Karthik Krishnan
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Nearest neighbor 3D segmentation with context features
Author(s): Evelin Hristova; Heinrich Schulz; Tom Brosch; Mattias P. Heinrich; Hannes Nickisch
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Detecting multiple myeloma via generalized multiple-instance learning
Author(s): Jan Hering; Jan Kybic; Lukáš Lambert
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A multilevel Markov Chain Monte Carlo approach for uncertainty quantification in deformable registration
Author(s): Sandra Schultz; Heinz Handels; Jan Ehrhardt
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Quadratic: quality of dice in registration circuits
Author(s): Shikha Chaganti; Bennett A. Landman
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Self-reference-based and during-registration detection of motion artifacts in spatio-temporal image data
Author(s): Eike Mücke; Heinz Handels; René Werner
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GPU-based stochastic-gradient optimization for non-rigid medical image registration in time-critical applications
Author(s): Parag Bhosale; Marius Staring; Zaid Al-Ars; Floris F. Berendsen
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Deformable image registration using convolutional neural networks
Author(s): Koen A. J. Eppenhof; Maxime W. Lafarge; Pim Moeskops; Mitko Veta; Josien P. W. Pluim
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Foveal fully convolutional nets for multi-organ segmentation
Author(s): Tom Brosch; Axel Saalbach
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A novel framework for the local extraction of extra-axial cerebrospinal fluid from MR brain images
Author(s): Mahmoud Mostapha; Mark D. Shen; SunHyung Kim; Meghan Swanson; D. Louis Collins; Vladimir Fonov; Guido Gerig; Joseph Piven; Martin A. Styner
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A statistical model for image registration performance: effect of tissue deformation
Author(s): M. D. Ketcha; T. De Silva; R. Han; A. Uneri; M. W. Jacobson; S. Vogt; G. Kleinszig; J. H. Siewerdsen
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SHARD: spherical harmonic-based robust outlier detection for HARDI methods
Author(s): Vishwesh Nath; Kurt G. Schilling; Allison E. Hainline; Prasanna Parvathaneni; Justin A. Blaber; Ilwoo Lyu; Adam W. Anderson; Hakmook Kang; Allen T. Newton; Baxter P. Rogers; Bennett A. Landman
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Regional autonomy changes in resting-state functional MRI in patients with HIV associated neurocognitive disorder
Author(s): Adora M. DSouza; Anas Z. Abidin; Udaysankar Chockanathan; Axel Wismüller
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Tensor-based vs. matrix-based rank reduction in dynamic brain connectivity
Author(s): Fatemeh Mokhtari; Rhiannon E. Mayhugh; Christina E. Hugenschmidt; W. Jack Rejeski; Paul J. Laurienti
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Extrapolated nonnegative decompositions for the analysis of functional connectivity
Author(s): Nicolas Honnorat; Christos Davatzikos
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Strain map of the tongue in normal and ALS speech patterns from tagged and diffusion MRI
Author(s): Fangxu Xing; Jerry L. Prince; Maureen Stone; Timothy G. Reese; Nazem Atassi; Van J. Wedeen; Georges El Fakhri; Jonghye Woo
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TRAFIC: fiber tract classification using deep learning
Author(s): Prince D. Ngattai Lam; Gaetan Belhomme; Jessica Ferrall; Billie Patterson; Martin Styner; Juan C. Prieto
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Evaluation of inter-site bias and variance in diffusion-weighted MRI
Author(s): Allison E. Hainline; Vishwesh Nath; Prasanna Parvathaneni; Justin Blaber; Baxter Rogers; Allen Newton; Jeffrey Luci; Heidi Edmonson; Hakmook Kang; Bennett A. Landman
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A novel filtering approach for 3D harmonic phase analysis of tagged MRI
Author(s): Xiaokai Wang; Maureen L. Stone; Jerry L. Prince; Arnold D. Gomez
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Feasibility of intra-acquisition motion correction for 4D DSA reconstruction for applications in the thorax and abdomen
Author(s): Martin Wagner; Paul Laeseke; Colin Harari; Sebastian Schafer; Michael Speidel; Charles Mistretta
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Deep-learning-based CT motion artifact recognition in coronary arteries
Author(s): T. Elss; H. Nickisch; T. Wissel; H. Schmitt; M. Vembar; M. Morlock; M. Grass
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Population-based respiratory 4D motion atlas construction and its application for VR simulations of liver punctures
Author(s): Andre Mastmeyer; Matthias Wilms; Heinz Handels
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Sensitivity analysis of Jacobian determinant used in treatment planning for lung cancer
Author(s): Wei Shao; Sarah E. Gerard; Yue Pan; Taylor J. Patton; Joseph M. Reinhardt; Oguz C. Durumeric; John E. Bayouth; Gary E. Christensen
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HoDOr: histogram of differential orientations for rigid landmark tracking in medical images
Author(s): Abhishek Tiwari; Kedar Anil Patwardhan
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Topological leakage detection and freeze-and-grow propagation for improved CT-based airway segmentation
Author(s): Syed Ahmed Nadeem; Eric A. Hoffman; Jered P. Sieren; Punam K. Saha
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Inter-scanner variation independent descriptors for constrained diffeomorphic demons registration of retina OCT
Author(s): S. Reaungamornrat; A. Carass; Y. He; S. Saidha; P. A. Calabresi; J. L. Prince
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A temporal-frequency variant on robust-principle component analysis for segmentation of motile cilia in optical coherence tomography images (Conference Presentation)
Author(s): James P. McLean; Yuye Ling; Christine Hendon
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Classification of malignant and benign liver tumors using a radiomics approach
Author(s): Martijn P. A. Starmans; Razvan L. Miclea; Sebastian R. van der Voort; Wiro J. Niessen; Maarten G. Thomeer; Stefan Klein
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Quantitative phase and texture angularity analysis of brain white matter lesions in multiple sclerosis
Author(s): Shalese Baxandall; Shrushrita Sharma; Peng Zhai; Glen Pridham; Yunyan Zhang
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MRI tumor segmentation with densely connected 3D CNN
Author(s): Lele Chen; Yue Wu; Adora M. DSouza; Anas Z. Abidin; Axel Wismüller; Chenliang Xu
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Quantification of lung abnormalities in cystic fibrosis using deep networks
Author(s): Filipe Marques; Florian Dubost; Mariette Kemner-van de Corput; Harm A. W. Tiddens; Marleen de Bruijne
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Deep learning for biomarker regression: application to osteoporosis and emphysema on chest CT scans
Author(s): Germán González; George R. Washko; Raúl San José Estépar
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Microaneurysm detection using deep learning and interleaved freezing
Author(s): Piotr Chudzik; Somshubra Majumdar; Francesco Caliva; Bashir Al-Diri; Andrew Hunter
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Dataset variability leverages white-matter lesion segmentation performance with convolutional neural network
Author(s): Domen Ravnik; Tim Jerman; Franjo Pernuš; Boštjan Likar; Žiga Špiclin
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Modelling the progression of Alzheimer's disease in MRI using generative adversarial networks
Author(s): Christopher Bowles; Roger Gunn; Alexander Hammers; Daniel Rueckert
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Learning implicit brain MRI manifolds with deep learning
Author(s): Camilo Bermudez; Andrew J. Plassard; Larry T. Davis; Allen T. Newton; Susan M. Resnick; Bennett A. Landman
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Chest x-ray generation and data augmentation for cardiovascular abnormality classification
Author(s): Ali Madani; Mehdi Moradi; Alexandros Karargyris; Tanveer Syeda-Mahmood
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Contextual loss functions for optimization of convolutional neural networks generating pseudo CTs from MRI
Author(s): M. van Stralen; Y. Zhou; P. J. Wozny; P. R. Seevinck; M. Loog
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Multi-grid nonlocal techniques for x-ray scatter correction
Author(s): Yingying Gu; Jun Zhang; Ping Xue
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A denoising algorithm for CT image using low-rank sparse coding
Author(s): Yang Lei; Dong Xu; Zhengyang Zhou; Tonghe Wang; Xue Dong; Tian Liu; Anees Dhabaan; Walter J. Curran; Xiaofeng Yang
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A new method to reduce cone beam artifacts by optimal combination of FDK and TV-IR images
Author(s): Shinkook Choi; Jongduk Baek
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CT artifact reduction via U-net CNN
Author(s): C. Zhang; Y. Xing
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Automatic segmentation of thoracic aorta segments in low-dose chest CT
Author(s): Julia M. H. Noothout; Bob D. de Vos; Jelmer M. Wolterink; Ivana Išgum
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Fast super-resolution with iterative-guided back projection for 3D MR images
Author(s): Yutaro Iwamoto; Xian-Hua Han; Akihiko Shiino; Yen-Wei Chen
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Automatic localization and segmentation of optical disk based on faster R-CNN and level set in fundus image
Author(s): Defeng Zhang; Weifang Zhu; Heming Zhao; Fei Shi; Xinjian Chen
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Circle-like foreign element detection in chest x-rays using normalized cross-correlation and unsupervised clustering
Author(s): Fatema T. Zohora; Sameer Antani; K. C. Santosh
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Orientation regression in hand radiographs: a transfer learning approach
Author(s): Ivo M. Baltruschat; Axel Saalbach; Mattias P. Heinrich; Hannes Nickisch; Sascha Jockel
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Organ localization and identification in thoracic CT volumes using 3D CNNs leveraging spatial anatomic relations
Author(s): Rajath Elias Soans; James A. Shackleford
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Automatic valve segmentation in cardiac ultrasound time series data
Author(s): Yoni Dukler; Yurun Ge; Yizhou Qian; Shintaro Yamamoto; Baichuan Yuan ; Long Zhao; Andrea L. Bertozzi; Blake Hunter; Rafael Llerena; Jesse T. Yen
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Transfer learning for diabetic retinopathy
Author(s): Jeremy Benson; Hector Carrillo; Jeff Wigdahl; Sheila Nemeth; John Maynard; Gilberto Zamora; Simon Barriga; Trilce Estrada; Peter Soliz
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Extraction of brain tissue from CT head images using fully convolutional neural networks
Author(s): Zeynettin Akkus; Petro M. Kostandy; Kenneth A. Philbrick; Bradley J. Erickson
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Deep learning-based depth estimation from a synthetic endoscopy image training set
Author(s): Faisal Mahmood; Nicholas J. Durr
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Automatic lung ultrasound B-line recognition in pediatric populations for the detection of pneumonia
Author(s): G. Eche; O. Zenteno; B. Castaneda
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Brain decoding using deep convolutional network and its application in cross-subject analysis
Author(s): Yufei Gao; Yameng Zhang; Wen Zhou; Li Yao; Jiacai Zhang
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Neural network fusion: a novel CT-MR aortic aneurysm image segmentation method
Author(s): Duo Wang; Rui Zhang; Jin Zhu; Zhongzhao Teng; Yuan Huang; Filippo Spiga; Michael Hong-Fei Du; Jonathan H. Gillard; Qingsheng Lu; Pietro Liò
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Spine centerline extraction and efficient spine reading of MRI and CT data
Author(s): C. Lorenz; N. Vogt; P. Börnert; T. Brosch
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Segmentation of subcutaneous fat within mouse skin in 3D OCT image data using random forests
Author(s): Timo Kepp; Christine Droigk; Malte Casper; Michael Evers; Nunciada Salma; Dieter Manstein M.D.; Heinz Handels
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Automatic detection of the inner ears in head CT images using deep convolutional neural networks
Author(s): Dongqing Zhang; Jack H. Noble; Benoit M. Dawant
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Multiorgan structures detection using deep convolutional neural networks
Author(s): Jorge Onieva Onieva; Germán González Serrano; Thomas P. Young; George R. Washko; María Jesús Ledesma Carbayo; Raúl San José Estépar
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Coupling reconstruction and motion estimation for dynamic MRI through optical flow constraint
Author(s): Ningning Zhao; Daniel O'Connor; Wenbo Gu; Dan Ruan; Adrian Basarab; Ke Sheng
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Sinogram synthesis using convolutional-neural-network for sparsely view-sampled CT
Author(s): Jongha Lee; Hoyeon Lee; Seungryong Cho
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High resolution robust and smooth precision matrices to capture functional connectivity
Author(s): Nicolas Honnorat; Christos Davatzikos
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Hubs defined with participation coefficient metric altered following acute mTBI
Author(s): Xiaocui Wang; Chuanzhu Sun; Shan Wang; Jieli Cao; Hui Xu; Shuoqiu Gan; Zhen Chen; Bo Yin; Guanghui Bai; Meihua Shao; Chenghui Gu; Liuxun Hu; Limei Ye; Dandong Li; Zhihan Yan; Lijun Bai
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Aorta and pulmonary artery segmentation using optimal surface graph cuts in non-contrast CT
Author(s): Zahra Sedghi Gamechi; Andres M. Arias-Lorza; Jesper Holst Pedersen; Marleen de Bruijne
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Model based rib-cage unfolding for trauma CT
Author(s): Jens von Berg; Tobias Klinder; Cristian Lorenz
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Thoracic lymph node station recognition on CT images based on automatic anatomy recognition with an optimal parent strategy
Author(s): Guoping Xu; Jayaram K. Udupa; Yubing Tong; Hanqiang Cao; Dewey Odhner; Drew A. Torigian; Xingyu Wu
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Tapering analysis of airways with bronchiectasis
Author(s): Kin Quan; Rebecca J. Shipley; Ryutaro Tanno; Graeme McPhillips; Vasileios Vavourakis; David Edwards; Joseph Jacob; John R. Hurst; David J. Hawkes
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Volumetric versus area-based density assessment: comparisons using automated quantitative measurements from a large screening cohort
Author(s): Aimilia Gastounioti; Meng-Kang Hsieh; Lauren Pantalone; Emily F. Conant; Despina Kontos
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Subject-specific brain tumor growth modelling via an efficient Bayesian inference framework
Author(s): Yongjin Chang; Gregory C. Sharp; Quanzheng Li; Helen A. Shih; Georges El Fakhri; Jong Beom Ra; Jonghye Woo
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Image-based assessment of uncertainty in quantification of carotid lumen
Author(s): Lilli Kaufhold; Andreas Harloff; Christian Schumann; Axel J. Krafft; Juergen Hennig; Anja Hennemuth
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Automated Agatston score computation in non-ECG gated CT scans using deep learning
Author(s): Carlos Cano-Espinosa; Germán González; George R. Washko; Miguel Cazorla; Raúl San José Estépar
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Generative statistical modeling of left atrial appendage appearance to substantiate clinical paradigms for stroke risk stratification
Author(s): Soroosh Sanatkhani; Prahlad G. Menon
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Feature analysis of high SUV regions based on FDG-PET
Author(s): Y. Torigoe; S. Oshiro; T. Tetsuya; M. Senda
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Relating regional characteristics of left atrial shape to presence of scar in patients with atrial fibrillation
Author(s): Soroosh Sanatkhani; Michael Oladosu; Karandeep Chera; Sotirios Nedios; Prahlad G. Menon
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Automatic anatomy recognition using neural network learning of object relationships via virtual landmarks
Author(s): Fengxia Yan; Jayaram K. Udupa; Yubing Tong; Guoping Xu; Dewey Odhner; Drew A. Torigian
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Training classifiers with limited data using the Radon cumulative distribution transform
Author(s): Cailey E. Fitzgerald; Liam Cattell; Gustavo K. Rohde
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Enhancement of breast periphery region in digital mammography
Author(s): Ana Luiza Menegatti Pavan; Antoine Vacavant; Andre Petean Trindade; Caio Cesar Quini; Diana Rodrigues de Pina
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Fast diffeomorphic image registration via GPU-based parallel computing: an investigation of the matching cost function
Author(s): Jiong Wu; Xiaoying Tang
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Group-wise shape correspondence of variable and complex objects
Author(s): Ilwoo Lyu; Jonathan Perdomo; Gabriel S. Yapuncich; Beatriz Paniagua; Doug M. Boyer; Martin A. Styner
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Student beats the teacher: deep neural networks for lateral ventricles segmentation in brain MR
Author(s): Mohsen Ghafoorian; Jonas Teuwen; Rashindra Manniesing; Frank-Erik de Leeuw; Bram van Ginneken; Nico Karssemeijer; Bram Platel
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Fully convolutional neural networks improve abdominal organ segmentation
Author(s): Meg F. Bobo; Shunxing Bao; Yuankai Huo; Yuang Yao; Jack Virostko; Andrew J. Plassard; Ilwoo Lyu; Albert Assad; Richard G. Abramson; Melissa A. Hilmes; Bennett A. Landman
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Multi-class segmentation of neuronal electron microscopy images using deep learning
Author(s): Nivedita Khobragade; Chirag Agarwal
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Automatic segmentation of fibroglandular tissue in breast MRI using anatomy-driven three-dimensional spatial context
Author(s): Dong Wei; Susan Weinstein; Meng-Kang Hsieh; Lauren Pantalone; Despina Kontos
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Extraction of breast lesions from ultrasound imagery: Bhattacharyya gradient flow approach
Author(s): Mahsa Torkaman; Romeil Sandhu; Allen Tannenbaum
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Coupled dictionary learning for joint MR image restoration and segmentation
Author(s): Xuesong Yang; Yong Fan
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Exudate segmentation using fully convolutional neural networks and inception modules
Author(s): Piotr Chudzik; Somshubra Majumdar; Francesco Caliva; Bashir Al-Diri; Andrew Hunter
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Deformable model reconstruction of the subarachnoid space
Author(s): Jeffrey Glaister; Muhan Shao; Xiang Li; Aaron Carass; Snehashis Roy; Ari M. Blitz; Jerry L. Prince; Lotta M. Ellingsen
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Convolutional neural network based automatic plaque characterization for intracoronary optical coherence tomography images
Author(s): Shenghua He; Jie Zheng; Akiko Maehara; Gary Mintz; Dalin Tang; Mark Anastasio; Hua Li
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Sequential neural networks for biologically informed glioma segmentation
Author(s): Andrew Beers; Ken Chang; James Brown; Elizabeth Gerstner; Bruce Rosen; Jayashree Kalpathy-Cramer
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A hybrid segmentation method for partitioning the liver based on 4D DCE-MR images
Author(s): Tian Zhang; Zhiyi Wu; Jurgen H. Runge; Cristina Lavini; Jaap Stoker; Thomas van Gulik; Kasia P. Cieslak; Lucas J. van Vliet; Frans M. Vos
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A new medical image segmentation model based on fractional order differentiation and level set
Author(s): Bo Chen; Shan Huang; Feifei Xie; Lihong Li; Wensheng Chen; Zhengrong Liang
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Automatic PET cervical tumor segmentation by deep learning with prior information
Author(s): Liyuan Chen; Chenyang Shen; Shulong Li; Genevieve Maquilan; Kevin Albuquerque; Michael R. Folkert; Jing Wang
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Automated segmentation of cellular images using an effective region force
Author(s): Khadeejah Mohiuddin; Justin W. L. Wan
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Improved stability of whole brain surface parcellation with multi-atlas segmentation
Author(s): Yuankai Huo; Shunxing Bao; Prasanna Parvathaneni; Bennett A. Landman
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Feature extraction using convolutional neural networks for multi-atlas based image segmentation
Author(s): Xuesong Yang; Yong Fan
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Random walk based optic chiasm localization using multi-parametric MRI for patients with pituitary adenoma
Author(s): Min Sun; Zhiqiang Zhang M.D.; Chiyuan Ma M.D.; Suihua Chen; Xinjian Chen
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Advanced two-layer level set with a soft distance constraint for dual surfaces segmentation in medical images
Author(s): Yuanbo Ji; Rob J. van der Geest; Saman Nazarian; Boudewijn P. F. Lelieveldt; Qian Tao
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