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Proceedings Paper

A CytometryML table of contents that describes relationships between elements based upon DICOM and flow cytometry standard
Author(s): Robert C. Leif; Stephanie H. Leif
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Paper Abstract

CytometryML is an XML schema based translation, extension and amalgamation of the DICOM and ISAC standards. CytometryML consists of 4 major XML schemas: Series, Instance, Instrument, and Specimen; it also includes Image and List-Mode schemas. Series metadata, which is specific for an entire collection of images and/or list-mode files produced by a single instrument and derived from a single specimen, is stored together with associated metadata files in a container (ZIP) file. Each Instance container file includes binary image and/or list-mode files together with associated metadata files that are specific for a single or closely related group of instrument runs from a single specimen. The Archival Cytometry Standard (ACS) proposed Table of Contents schema including its Resource Description Framework (RDF) capabilities has been extended and modified for use in the Instance schema.

Paper Details

Date Published: 22 February 2011
PDF: 9 pages
Proc. SPIE 7902, Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues IX, 790217 (22 February 2011); doi: 10.1117/12.879767
Show Author Affiliations
Robert C. Leif, Newport Instruments (United States)
Stephanie H. Leif, Newport Instruments (United States)


Published in SPIE Proceedings Vol. 7902:
Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues IX
Daniel L. Farkas; Dan V. Nicolau; Robert C. Leif, Editor(s)

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