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Proceedings Paper

A novel DNA restriction technology based on laser pulse energy conversion on sequence-specific bound metal nanoparticles
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Paper Abstract

DNA restriction is a basic method in today’s molecular biology. Besides application for DNA manipulation, this method is used in DNA analytics for 'restriction analysis'. Thereby DNA is digested by sequence specific restriction enzymes, and the length distribution of the resulting fragments is detected by gel electrophoresis. Differences in the sequence lead to different restriction patterns. A disadvantage of this standard method is the limitation to a small set of fixed sequences, so that the assay can not be adapted to any sequence of interest (e.g. SNP). We designed a scheme for DNA restriction in order to provide access to any desired sequence, based on laser light conversion on sequence-specific positioned metal nanoparticles. Especially gold nanoparticles are known for their interesting optical properties caused by plasmon resonance. The resulting absorption can be used to convert laser light pulses into heat, resulting in nanoparticle destruction. We work on the combination of this principle with DNA-modification of nanoparticles and the sequence-specific binding (hybridization) of these DNA-nanoparticle complexes along DNA molecules. Different mechanisms of light-conversion were studied, and the destructive effect of laser light on the nanoparticles and DNA is demonstrated.

Paper Details

Date Published: 29 March 2005
PDF: 6 pages
Proc. SPIE 5699, Imaging, Manipulation, and Analysis of Biomolecules and Cells: Fundamentals and Applications III, (29 March 2005); doi: 10.1117/12.590450
Show Author Affiliations
Andrea Csaki, Institute for Physical High Technology (Germany)
Gunter Maubach, Institute for Physical High Technology (Germany)
Frank Garwe, JenLab GmbH (Germany)
Andrea Steinbrueck, Institute for Physical High Technology (Germany)
Karsten Koenig, JenLab GmbH (Germany)
Wolfgang Fritzsche, Institute for Physical High Technology (Germany)


Published in SPIE Proceedings Vol. 5699:
Imaging, Manipulation, and Analysis of Biomolecules and Cells: Fundamentals and Applications III
Dan V. Nicolau; Dan V. Nicolau; Jörg Enderlein; Ramesh Raghavachari; Robert C. Leif; Daniel L. Farkas, Editor(s)

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