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Proceedings Paper

NIHmagic: 3D visualization, registration, and segmentation tool
Author(s): Raisa Z. Freidlin; Chikai J. Ohazama; Andrew E. Arai; Delia P. McGarry; Julio A. Panza; Benes L. Trus
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Paper Abstract

Interactive visualization of multi-dimensional biological images has revolutionized diagnostic and therapy planning. Extracting complementary anatomical and functional information from different imaging modalities provides a synergistic analysis capability for quantitative and qualitative evaluation of the objects under examination. We have been developing NIHmagic, a visualization tool for research and clinical use, on the SGI OnyxII Infinite Reality platform. Images are reconstructed into a 3D volume by volume rendering, a display technique that employs 3D texture mapping to provide a translucent appearance to the object. A stack of slices is rendered into a volume by an opacity mapping function, where the opacity is determined by the intensity of the voxel and its distance from the viewer. NIHmagic incorporates 3D visualization of time-sequenced images, manual registration of 2D slices, segmentation of anatomical structures, and color-coded re-mapping of intensities. Visualization of MIR, PET, CT, Ultrasound, and 3D reconstructed electron microscopy images has been accomplished using NIHmagic.

Paper Details

Date Published: 5 May 2000
PDF: 8 pages
Proc. SPIE 3905, 28th AIPR Workshop: 3D Visualization for Data Exploration and Decision Making, (5 May 2000); doi: 10.1117/12.384874
Show Author Affiliations
Raisa Z. Freidlin, National Institutes of Health (United States)
Chikai J. Ohazama, Silicon Graphics Inc. (United States)
Andrew E. Arai, National Institutes of Health (United States)
Delia P. McGarry, National Institutes of Health (United States)
Julio A. Panza, National Institutes of Health (United States)
Benes L. Trus, National Institutes of Health (United States)


Published in SPIE Proceedings Vol. 3905:
28th AIPR Workshop: 3D Visualization for Data Exploration and Decision Making
William R. Oliver, Editor(s)

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