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Proceedings Paper

Time-zoomable FRET spectroscopy with a 512 x16 SPAD line sensor
Author(s): Ahmet T. Erdogan; Gareth O. S. Williams; Andrea Usai; Nikola Krstajic; Neil Finlayson; Andrew Beavil; Rebecca Beavil; Robert K. Henderson
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Paper Abstract

We demonstrate a new 512x16 single photon avalanche diode (SPAD) based line sensor with per-pixel TCSPC histogramming for time-resolved, time-zoomable, FRET spectroscopy. The line sensor can operate in single photon counting (SPC) mode as well as time-correlated single photon counting (TCSPC) and per-pixel histogramming modes. TCSPC has been the preferred method for fluorescence lifetime measurements due to its collection of full decays as a histogram of arrival times. However, TCSPC is slow due to only capturing one photon per exposure and large timestamp data transfer requirements for offline histogramming. On-chip histogramming improves the data rate by allowing multiple SPAD pulses (up to one pulse per laser period) to be processed in each exposure cycle, along with secondly reducing the I/O bottleneck as only the final histogram is transferred. This can enable 50x higher acquisition rates (up to 10 billion counts per second), along with time-zoomable histogramming operation from 1.6ns to 205ns with 50ps resolution. A broad spectral range can be interrogated with the sensor (450-900nm). Overall, these sensors provide a unique combination of light sensing capabilities for use in high speed, sensitive, optical instrumentation in the time/wavelength domain. We test the sensor performance by observation of fluorescence resonance energy transfer (FRET) between FAM and TAMRA and between EGFP and RFP FRET standards.

Paper Details

Date Published: 20 February 2018
PDF: 9 pages
Proc. SPIE 10504, Biophysics, Biology and Biophotonics III: the Crossroads, 105040M (20 February 2018); doi: 10.1117/12.2290058
Show Author Affiliations
Ahmet T. Erdogan, The Univ. of Edinburgh (United Kingdom)
Gareth O. S. Williams, Queen's Medical Research Institute, The Univ. of Edinburgh (United Kingdom)
Andrea Usai, The Univ. of Edinburgh (United Kingdom)
Nikola Krstajic, Queen's Medical Research Institute, The Univ. of Edinburgh (United Kingdom)
Neil Finlayson, The Univ. of Edinburgh (United Kingdom)
Andrew Beavil, King's College London (United Kingdom)
Rebecca Beavil, King's College London (United Kingdom)
Robert K. Henderson, The Univ. of Edinburgh (United Kingdom)


Published in SPIE Proceedings Vol. 10504:
Biophysics, Biology and Biophotonics III: the Crossroads
Adam Wax; Vadim Backman, Editor(s)

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