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Proceedings Paper

Wavenumber selection based analysis in Raman spectroscopy improves skin cancer diagnostic specificity at high sensitivity levels (Conference Presentation)
Author(s): Jianhua Zhao; Haishan Zeng; Sunil Kalia; Harvey Lui
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Paper Abstract

Background: Raman spectroscopy is a non-invasive optical technique which can measure molecular vibrational modes within tissue. A large-scale clinical study (n = 518) has demonstrated that real-time Raman spectroscopy could distinguish malignant from benign skin lesions with good diagnostic accuracy; this was validated by a follow-up independent study (n = 127). Objective: Most of the previous diagnostic algorithms have typically been based on analyzing the full band of the Raman spectra, either in the fingerprint or high wavenumber regions. Our objective in this presentation is to explore wavenumber selection based analysis in Raman spectroscopy for skin cancer diagnosis. Methods: A wavenumber selection algorithm was implemented using variably-sized wavenumber windows, which were determined by the correlation coefficient between wavenumbers. Wavenumber windows were chosen based on accumulated frequency from leave-one-out cross-validated stepwise regression or least and shrinkage selection operator (LASSO). The diagnostic algorithms were then generated from the selected wavenumber windows using multivariate statistical analyses, including principal component and general discriminant analysis (PC-GDA) and partial least squares (PLS). A total cohort of 645 confirmed lesions from 573 patients encompassing skin cancers, precancers and benign skin lesions were included. Lesion measurements were divided into training cohort (n = 518) and testing cohort (n = 127) according to the measurement time. Result: The area under the receiver operating characteristic curve (ROC) improved from 0.861–0.891 to 0.891–0.911 and the diagnostic specificity for sensitivity levels of 0.99-0.90 increased respectively from 0.17–0.65 to 0.20–0.75 by selecting specific wavenumber windows for analysis. Conclusion: Wavenumber selection based analysis in Raman spectroscopy improves skin cancer diagnostic specificity at high sensitivity levels.

Paper Details

Date Published: 19 April 2017
PDF: 1 pages
Proc. SPIE 10037, Photonics in Dermatology and Plastic Surgery, 1003708 (19 April 2017); doi: 10.1117/12.2256375
Show Author Affiliations
Jianhua Zhao, The Univ. of British Columbia (Canada)
BC Cancer Agency Research Ctr. (Canada)
Haishan Zeng, BC Cancer Research Ctr. (Canada)
The Univ. of Biritish Columbia (Canada)
Sunil Kalia, The Univ. of British Columbia (Canada)
Harvey Lui, The Univ. of British Columbia (Canada)


Published in SPIE Proceedings Vol. 10037:
Photonics in Dermatology and Plastic Surgery
Bernard Choi; Haishan Zeng; Nikiforos Kollias, Editor(s)

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